Basic Information
Locus ID:
gene:TRIDC2AG035040
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CPK18
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 373609651 | 373657118 | + | gene:TRIDC2AG035040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 39,448.48 Da | 30.70 | 85.79 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 6 | 151 | 3.4E-39 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 197 | 260 | 1.3E-7 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 280 | 332 | 7.2E-10 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 181 | 335 | 1.09E-34 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 189 | 2.46E-44 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 159 | 3.9E-47 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 168 | 331 | 8.9E-43 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 192 | 261 | 8.9E-43 | - |
| SMART | SM00220 | serkin_6 | 1 | 151 | 2.4E-11 | IPR000719 |
| SMART | SM00054 | efh_1 | 307 | 335 | 0.0025 | IPR002048 |
| SMART | SM00054 | efh_1 | 198 | 226 | 2.9E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 235 | 263 | 2.4 | IPR002048 |
| SMART | SM00054 | efh_1 | 277 | 305 | 1.1 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 231 | 266 | 9.687501 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 151 | 30.336523 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 273 | 308 | 10.608049 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 194 | 229 | 13.007053 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 311 | 338 | 10.580154 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 286 | 298 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 316 | 328 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 207 | 219 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 244 | 256 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 13 | 25 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66210.1 | calcium-dependent protein kinase 28. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_037477230.1 | calcium-dependent protein kinase 18 isoform X4 [Triticum dicoccoides] | 0 |
| Q0D715 | Calcium-dependent protein kinase 18 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6AWG8 | Calcium-dependent protein kinase 28 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG035040.