Basic Information
Locus ID:
gene:TRIDC2AG034050
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 344553745 | 344565541 | + | gene:TRIDC2AG034050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 127,125.36 Da | 38.16 | 78.46 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 24 | 147 | 1.47434E-37 | IPR002083 |
| CDD | cd02659 | peptidase_C19C | 165 | 493 | 9.35199E-166 | - |
| Pfam | PF00917 | MATH domain | 29 | 149 | 5.1E-18 | IPR002083 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 167 | 488 | 7.4E-47 | IPR001394 |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 592 | 844 | 7.5E-74 | IPR024729 |
| Pfam | PF14533 | Ubiquitin-specific protease C-terminal | 854 | 1062 | 8.6E-57 | IPR029346 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 162 | 519 | 1.31E-97 | IPR038765 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 23 | 157 | 7.52E-40 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 653 | 768 | 8.2E-41 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 164 | 492 | 4.9E-89 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 22 | 163 | 3.6E-51 | IPR008974 |
| Gene3D | G3DSA:3.10.20.90 | - | 770 | 867 | 2.1E-27 | - |
| SMART | SM00061 | math_3 | 24 | 128 | 1.0E-18 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 22 | 147 | 36.678711 | IPR002083 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 167 | 491 | 39.659801 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 168 | 183 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 407 | 424 | - | IPR018200 |
| Coils | Coil | Coil | 504 | 531 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06600.1 | ubiquitin-specific protease 12. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_037477165.1 | ubiquitin carboxyl-terminal hydrolase 12-like [Triticum dicoccoides] | 0 |
| Q9FPT1 | Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6AYN8 | ubiquitinyl hydrolase 1 OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG034050.