Basic Information
Locus ID:
gene:TRIDC2AG033800
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 340228998 | 340233204 | - | gene:TRIDC2AG033800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 58,512.86 Da | 40.20 | 87.58 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 68 | 325 | 7.66104E-142 | - |
| CDD | cd00051 | EFh | 374 | 433 | 5.49148E-18 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 374 | 434 | 5.9E-12 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 444 | 505 | 1.1E-13 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 68 | 326 | 7.8E-75 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 67 | 327 | 2.97E-83 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 365 | 506 | 8.98E-46 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 333 | 509 | 1.7E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 70 | 153 | 1.3E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 154 | 332 | 3.5E-56 | - |
| SMART | SM00054 | efh_1 | 479 | 507 | 8.8E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 373 | 401 | 6.8E-7 | IPR002048 |
| SMART | SM00220 | serkin_6 | 68 | 326 | 1.7E-98 | IPR000719 |
| SMART | SM00054 | efh_1 | 409 | 437 | 0.74 | IPR002048 |
| SMART | SM00054 | efh_1 | 445 | 473 | 0.0022 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 369 | 404 | 15.768698 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 405 | 440 | 9.687501 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 477 | 510 | 12.644413 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 68 | 326 | 47.42453 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 441 | 476 | 14.48551 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 382 | 394 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 74 | 101 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 454 | 466 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 188 | 200 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 488 | 500 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 418 | 430 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38910.1 | calcium-dependent protein kinase 20. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_037477147.1 | calcium-dependent protein kinase 17 [Triticum dicoccoides] | 0 |
| Q7XIM0 | Calcium-dependent protein kinase 17 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK17 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6AY82 | Calcium-dependent protein kinase 20 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG033800.