Basic Information
Locus ID:
gene:TRIDC2AG032760
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 324337973 | 324343808 | - | gene:TRIDC2AG032760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 114,104.01 Da | 34.63 | 99.41 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 413 | 471 | 2.2E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 790 | 988 | 1.0E-26 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 122 | 144 | 0.89 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 510 | 569 | 1.1E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 70 | 1.0E-9 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 82 | 490 | 5.1E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 789 | 1065 | 1.71E-45 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 483 | 605 | 7.37E-24 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 775 | 863 | 1.9E-9 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 185 | 7.8E-41 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 865 | 1068 | 5.0E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 186 | 240 | 1.3E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 241 | 621 | 1.6E-80 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 168 | 191 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 458 | 482 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 120 | 144 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 532 | 555 | 96.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 192 | 216 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 317 | 341 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 96 | 119 | 210.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 786 | 1068 | 26.251797 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 673 | 732 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 673 | 702 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20940.1 | Leucine-rich receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_037477093.1 | LRR receptor-like serine/threonine-protein kinase GHR1 [Triticum dicoccoides] | 0 |
| C0LGQ9 | LRR receptor-like serine/threonine-protein kinase GHR1 OS=Arabidopsis thaliana OX=3702 GN=GHR1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6AYW7 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG032760.