Basic Information
Locus ID:
gene:TRIDC2AG031170
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Bromo adjacent homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 269407821 | 269428845 | - | gene:TRIDC2AG031170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.75 | 27,797.08 Da | 71.56 | 50.37 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04714 | BAH_BAHCC1 | 46 | 184 | 1.98195E-55 | - |
| Pfam | PF01426 | BAH domain | 49 | 163 | 1.2E-22 | IPR001025 |
| Pfam | PF00628 | PHD-finger | 168 | 216 | 3.0E-10 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 158 | 220 | 1.84E-18 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 159 | 232 | 1.2E-20 | IPR013083 |
| Gene3D | G3DSA:2.30.30.490 | - | 24 | 158 | 2.6E-29 | IPR043151 |
| SMART | SM00249 | PHD_3 | 168 | 215 | 2.8E-9 | IPR001965 |
| SMART | SM00439 | BAH_4 | 47 | 164 | 6.8E-39 | IPR001025 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 47 | 164 | 22.812593 | IPR001025 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 166 | 217 | 9.445499 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 169 | 214 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22140.2 | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein. | 0 |
| RefSeq | XP_037477015.1 | chromatin remodeling protein SHL-like isoform X3 [Triticum dicoccoides] | 0 |
| F4JL28 | Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6AVX6 | PHD-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG031170.