Basic Information
Locus ID:
gene:TRIDC2AG030740
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 255252609 | 255265223 | + | gene:TRIDC2AG030740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.42 | 54,917.03 Da | 60.30 | 64.86 | -0.89 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 430 | 469 | 5.48587E-16 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 428 | 476 | 6.0E-13 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 430 | 475 | 3.53E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 422 | 481 | 1.2E-13 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 431 | 470 | 11.043484 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 134 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 189 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 141 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20160.3 | - | 0 |
| RefSeq | XP_037476994.1 | uncharacterized protein LOC119354363 [Triticum dicoccoides] | 0 |
| Q24746 | Protein neuralized OS=Drosophila virilis OX=7244 GN=neur PE=4 SV=1 | 0 | |
| TrEMBL | A0A3B6AX23 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG030740.