Basic Information
Locus ID:
gene:TRIDC2AG030670
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 253832225 | 253836484 | - | gene:TRIDC2AG030670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 133,194.61 Da | 37.50 | 106.58 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 960 | 1241 | 1.73159E-86 | - |
| Pfam | PF13855 | Leucine rich repeat | 174 | 234 | 1.8E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 613 | 672 | 1.2E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 518 | 577 | 5.6E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 959 | 1237 | 4.6E-45 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 786 | 841 | 2.1E-10 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 73 | 2.4E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 422 | 481 | 6.3E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 334 | 672 | 2.04E-67 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 937 | 1241 | 1.64E-69 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 335 | 1.93E-66 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 586 | 844 | 1.48E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 344 | 419 | 1.8E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 420 | 496 | 5.8E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 196 | 269 | 3.7E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 270 | 343 | 1.1E-15 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 915 | 1034 | 2.9E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 497 | 874 | 1.9E-109 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1035 | 1250 | 7.8E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 193 | 4.0E-43 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 349 | 372 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 731 | 754 | 110.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 954 | 1246 | 2.4E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 540 | 564 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 828 | 859 | 6.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 444 | 468 | 8.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 396 | 420 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 635 | 658 | 91.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 755 | 779 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 492 | 516 | 78.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 221 | 245 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 100 | 123 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 317 | 341 | 47.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 124 | 148 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 683 | 707 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 804 | 827 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 173 | 197 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 269 | 292 | 250.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 954 | 1246 | 40.004181 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 960 | 982 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1083 | 1095 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 804 | 817 | 4.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 375 | 388 | 4.3E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20140.1 | Leucine-rich repeat transmembrane protein kinase. Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis. | 0 |
| RefSeq | XP_037476985.1 | LRR receptor-like serine/threonine-protein kinase GSO1 [Triticum dicoccoides] | 0 |
| C0LGQ5 | LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana OX=3702 GN=GSO1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6AX32 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG030670.