Basic Information
Locus ID:
gene:TRIDC2AG027870
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 198788359 | 198794630 | + | gene:TRIDC2AG027870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 91,445.52 Da | 39.82 | 80.83 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 38 | 157 | 1.26259E-33 | IPR001480 |
| CDD | cd14066 | STKc_IRAK | 533 | 804 | 4.18135E-91 | - |
| CDD | cd01098 | PAN_AP_plant | 344 | 428 | 4.07673E-27 | - |
| Pfam | PF01453 | D-mannose binding lectin | 78 | 182 | 2.4E-34 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 348 | 413 | 2.9E-21 | IPR003609 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 530 | 748 | 1.2E-45 | IPR001245 |
| Pfam | PF00954 | S-locus glycoprotein domain | 216 | 326 | 7.5E-28 | IPR000858 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 513 | 817 | 1.24E-77 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 79 | 188 | 8.38E-28 | IPR036426 |
| Gene3D | G3DSA:2.90.10.10 | - | 26 | 154 | 6.7E-19 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 603 | 810 | 2.7E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 491 | 602 | 1.2E-34 | - |
| SMART | SM00473 | ntp_6 | 348 | 427 | 1.6E-12 | IPR003609 |
| SMART | SM00220 | serkin_6 | 527 | 799 | 7.0E-28 | IPR000719 |
| SMART | SM00108 | blect_4 | 36 | 157 | 3.8E-34 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 3 | 846 | 1.2E-284 | IPR024171 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 527 | 816 | 35.990124 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 348 | 428 | 11.135971 | IPR003609 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 30 | 153 | 18.770485 | IPR001480 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 648 | 660 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 533 | 555 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21380.1 | receptor kinase 3. encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. | 0 |
| RefSeq | XP_044453067.1 | receptor-like serine/threonine-protein kinase SD1-8 [Triticum aestivum] | 0 |
| O81905 | Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana OX=3702 GN=SD18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6AX84 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG027870.