Basic Information
Locus ID:
gene:TRIDC2AG025680
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 174547995 | 174551215 | - | gene:TRIDC2AG025680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 61,993.01 Da | 37.30 | 81.74 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 75 | 333 | 5.91363E-137 | - |
| CDD | cd00051 | EFh | 453 | 515 | 3.65593E-17 | IPR002048 |
| Pfam | PF13833 | EF-hand domain pair | 398 | 444 | 3.2E-6 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 452 | 515 | 5.6E-14 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 76 | 334 | 8.1E-75 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 72 | 345 | 1.27E-85 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 362 | 539 | 3.27E-43 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 79 | 161 | 5.8E-29 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 343 | 517 | 1.0E-49 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 162 | 342 | 7.7E-58 | - |
| SMART | SM00054 | efh_1 | 417 | 445 | 1.7 | IPR002048 |
| SMART | SM00054 | efh_1 | 489 | 517 | 2.8E-7 | IPR002048 |
| SMART | SM00220 | serkin_6 | 76 | 334 | 2.5E-95 | IPR000719 |
| SMART | SM00054 | efh_1 | 453 | 481 | 0.43 | IPR002048 |
| SMART | SM00054 | efh_1 | 381 | 409 | 0.037 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 377 | 412 | 12.644413 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 485 | 520 | 15.071314 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 449 | 484 | 11.640179 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 413 | 448 | 9.464338 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 76 | 334 | 49.021671 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 82 | 105 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 196 | 208 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 426 | 438 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 462 | 474 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 498 | 510 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 44 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12480.1 | calmodulin-domain protein kinase 7. calmodulin-domain protein kinase CDPK isoform 7 (CPK7) | 0 |
| RefSeq | XP_037476683.1 | calcium-dependent protein kinase 20-like [Triticum dicoccoides] | 0 |
| Q84SL0 | Calcium-dependent protein kinase 20 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6AWC1 | Calcium-dependent protein kinase 30 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG025680.