Basic Information
Locus ID:
gene:TRIDC2AG025530
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
protein polyubiquitination
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 172403168 | 172403749 | + | gene:TRIDC2AG025530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.56 | 12,861.15 Da | 34.01 | 55.80 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 25 | 70 | 4.1E-8 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 25 | 80 | 2.3E-11 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 11 | 76 | 3.3E-12 | IPR013083 |
| SMART | SM00184 | ring_2 | 26 | 69 | 5.8E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 26 | 70 | 11.633604 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037481417.1 | E3 ubiquitin-protein ligase RDUF2-like [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6AWQ7 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG025530.