Basic Information
Locus ID:
gene:TRIDC2AG023820
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
protein modification by small protein conjugation
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 151393907 | 151397301 | + | gene:TRIDC2AG023820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.95 | 21,022.58 Da | 36.67 | 82.09 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 61 | 196 | 8.95312E-57 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 63 | 194 | 6.2E-39 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 47 | 200 | 6.29E-51 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 50 | 201 | 2.9E-53 | IPR016135 |
| SMART | SM00212 | ubc_7 | 61 | 201 | 8.8E-54 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 58 | 201 | 44.938457 | IPR000608 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 59 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13550.1 | Ubiquitin-conjugating enzyme family protein. Encodes a protein similar to ubiquitin-conjugating enzyme (E2) variant proteins (UEV); lacks catalytic cysteine residue found in ubiquitin-conjugating enzyme E2. Represses photomorphogenesis and induces skotomorphogenesis in the dark. | 0 |
| RefSeq | XP_037476564.1 | constitutive photomorphogenesis protein 10-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9LJD7 | Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana OX=3702 GN=COP10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6AV28 | UBC core domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG023820.