Basic Information
Locus ID:
gene:TRIDC2AG023740
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 150114663 | 150116722 | - | gene:TRIDC2AG023740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 74,351.22 Da | 32.94 | 97.05 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 26 | 268 | 1.64195E-86 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 356 | 622 | 1.19673E-91 | - |
| Pfam | PF00069 | Protein kinase domain | 351 | 559 | 4.3E-45 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 26 | 278 | 2.0E-76 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 332 | 641 | 1.21E-81 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 24 | 286 | 1.68E-74 | IPR013320 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 335 | 426 | 1.0E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 427 | 635 | 7.8E-59 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 23 | 267 | 7.3E-67 | - |
| SMART | SM00220 | serkin_6 | 350 | 620 | 8.4E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 350 | 620 | 37.855812 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 471 | 483 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 356 | 379 | - | IPR017441 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 142 | 148 | - | IPR019825 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_037476558.1 | L-type lectin-domain containing receptor kinase SIT2-like [Triticum dicoccoides] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6AWC0 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG023740.