Basic Information
Locus ID:
gene:TRIDC2AG021750
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Pex2 / Pex12 amino terminal region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 130894091 | 130899681 | - | gene:TRIDC2AG021750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.70 | 38,410.35 Da | 51.15 | 83.28 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16527 | RING-HC_PEX10 | 288 | 326 | 6.72406E-23 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 285 | 331 | 3.7E-9 | - |
| Pfam | PF04757 | Pex2 / Pex12 amino terminal region | 2 | 229 | 7.7E-49 | IPR006845 |
| SUPERFAMILY | SSF57850 | RING/U-box | 287 | 331 | 9.56E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 267 | 339 | 6.2E-15 | IPR013083 |
| SMART | SM00184 | ring_2 | 288 | 325 | 2.5E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 288 | 326 | 13.094151 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 303 | 312 | - | IPR017907 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26350.1 | peroxin 10. Zinc-binding peroxisomal integral membrane protein (PEX10). Inserted directly from the cytosol into peroxisomes and is involved in importing proteins into the peroxisome. Required for embryogenesis. | 0 |
| RefSeq | XP_037476408.1 | peroxisome biogenesis factor 10-like [Triticum dicoccoides] | 0 |
| Q9SYU4 | Peroxisome biogenesis factor 10 OS=Arabidopsis thaliana OX=3702 GN=PEX10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6AUX8 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG021750.