Basic Information
Locus ID:
gene:TRIDC2AG021150
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 122634648 | 122640725 | - | gene:TRIDC2AG021150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.04 | 79,569.12 Da | 34.93 | 82.25 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 47 | 87 | 1.7E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 136 | 193 | 4.0E-11 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 435 | 701 | 3.5E-35 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 265 | 8.5E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 410 | 702 | 3.65E-65 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 46 | 275 | 6.9E-47 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 396 | 508 | 7.4E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 509 | 727 | 1.6E-53 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 161 | 182 | 7.727356 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 208 | 230 | 7.350022 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 431 | 705 | 33.135056 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 288 | 304 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 287 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_037476353.1 | protein STRUBBELIG-RECEPTOR FAMILY 7-like isoform X3 [Triticum dicoccoides] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6ATT7 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG021150.