Basic Information
Locus ID:
gene:TRIDC2AG019640
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 106676558 | 106677552 | - | gene:TRIDC2AG019640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.89 | 19,307.46 Da | 55.12 | 72.47 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 87 | 126 | 1.76211E-16 | - |
| Pfam | PF13639 | Ring finger domain | 87 | 126 | 6.0E-14 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 87 | 132 | 5.74E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 87 | 150 | 1.4E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 88 | 125 | 6.9E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 88 | 126 | 12.518784 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 133 | 186 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 186 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G26800.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037476248.1 | E3 ubiquitin-protein ligase RING1-like [Triticum dicoccoides] | 0 |
| Q9LQX2 | E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6AVA5 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG019640.