Basic Information
Locus ID:
gene:TRIDC2AG019300
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 104785898 | 104788779 | + | gene:TRIDC2AG019300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 34,668.80 Da | 49.82 | 98.41 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 44 | 88 | 1.7E-6 | IPR001810 |
| Pfam | PF07723 | Leucine Rich Repeat | 145 | 165 | 0.03 | IPR013101 |
| SUPERFAMILY | SSF81383 | F-box domain | 29 | 96 | 6.15E-12 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 130 | 288 | 1.71E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 212 | 291 | 2.2E-6 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 43 | 85 | 1.3E-12 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 100 | 211 | 7.5E-14 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 41 | 88 | 8.782121 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05490.1 | RNI-like superfamily protein. | 0 |
| RefSeq | XP_037476224.1 | putative F-box/LRR-repeat protein 23 [Triticum dicoccoides] | 0 |
| Q9S9V9 | Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE=4 SV=1 | 0 | |
| TrEMBL | A0A3B6ATC6 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG019300.