Basic Information
Locus ID:
gene:TRIDC2AG015970
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 81181247 | 81184648 | + | gene:TRIDC2AG015970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 61,448.26 Da | 34.23 | 91.89 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 170 | 210 | 1.04069E-4 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 285 | 547 | 2.0E-43 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 284 | 552 | 1.62E-66 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 358 | 555 | 6.4E-53 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 128 | 217 | 7.5E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 264 | 357 | 1.1E-20 | - |
| SMART | SM00179 | egfca_6 | 170 | 217 | 6.2E-7 | IPR001881 |
| SMART | SM00181 | egf_5 | 118 | 169 | 97.0 | IPR000742 |
| SMART | SM00220 | serkin_6 | 283 | 549 | 1.4E-28 | IPR000719 |
| SMART | SM00181 | egf_5 | 173 | 217 | 0.0079 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 283 | 549 | 35.763981 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 170 | 213 | 8.731887 | IPR000742 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 289 | 311 | - | IPR017441 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 192 | 203 | - | IPR000152 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 402 | 414 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 170 | 201 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_048554896.1 | wall-associated receptor kinase 1-like isoform X1 [Triticum urartu] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8R7TDX3 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG015970.