Basic Information
Locus ID:
gene:TRIDC2AG015620
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
DDT domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 78589728 | 78599421 | + | gene:TRIDC2AG015620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 203,880.70 Da | 53.80 | 73.92 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15532 | PHD2_CHD_II | 414 | 455 | 1.31594E-16 | - |
| Pfam | PF02791 | DDT domain | 219 | 270 | 3.9E-12 | IPR018501 |
| Pfam | PF00628 | PHD-finger | 414 | 457 | 5.7E-8 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 1164 | 1212 | 3.54E-6 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 1370 | 1427 | 4.65E-10 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 400 | 460 | 2.66E-15 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 401 | 476 | 2.4E-15 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1367 | 1427 | 2.1E-11 | IPR013083 |
| SMART | SM00249 | PHD_3 | 413 | 456 | 4.7E-11 | IPR001965 |
| SMART | SM00571 | testlast3 | 216 | 276 | 2.4E-9 | IPR018501 |
| SMART | SM00249 | PHD_3 | 1373 | 1421 | 0.23 | IPR001965 |
| SMART | SM00249 | PHD_3 | 1166 | 1211 | 31.0 | IPR001965 |
| ProSiteProfiles | PS50827 | DDT domain profile. | 216 | 276 | 14.888616 | IPR018501 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 411 | 458 | 10.1842 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 414 | 455 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 370 | 407 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1084 | 1130 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 553 | 585 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 554 | 583 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1218 | 1301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1504 | 1534 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1227 | 1266 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1273 | 1294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 619 | 645 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 186 | - | - |
| Coils | Coil | Coil | 967 | 987 | - | - |
| Coils | Coil | Coil | 1133 | 1162 | - | - |
| Coils | Coil | Coil | 131 | 151 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12400.1 | DNA binding;zinc ion binding;DNA binding. | 0 |
| RefSeq | XP_037475975.1 | DDT domain-containing protein PTM-like [Triticum dicoccoides] | 0 |
| F4JYC8 | DDT domain-containing protein PTM OS=Arabidopsis thaliana OX=3702 GN=PTM PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6ATF7 | PHD-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG015620.