Basic Information
Locus ID:
gene:TRIDC2AG014710
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the TUB family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 74080714 | 74084548 | - | gene:TRIDC2AG014710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.70 | 42,244.15 Da | 57.13 | 76.52 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 49 | 99 | 2.4E-9 | IPR001810 |
| Pfam | PF01167 | Tub family | 113 | 371 | 2.5E-97 | IPR000007 |
| SUPERFAMILY | SSF81383 | F-box domain | 41 | 93 | 3.01E-6 | IPR036047 |
| SUPERFAMILY | SSF54518 | Tubby C-terminal domain-like | 99 | 374 | 2.35E-92 | IPR025659 |
| Gene3D | G3DSA:1.20.1280.50 | - | 43 | 98 | 4.5E-6 | - |
| Gene3D | G3DSA:3.20.90.10 | Tubby Protein; Chain A | 108 | 376 | 1.7E-90 | IPR025659 |
| ProSitePatterns | PS01200 | Tub family signature 1. | 306 | 319 | - | IPR018066 |
| PRINTS | PR01573 | Tubby superfamily signature | 165 | 181 | 1.5E-67 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 333 | 352 | 1.5E-67 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 181 | 205 | 1.5E-67 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 354 | 376 | 1.5E-67 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 306 | 322 | 1.5E-67 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 216 | 243 | 1.5E-67 | IPR000007 |
| PRINTS | PR01573 | Tubby superfamily signature | 288 | 305 | 1.5E-67 | IPR000007 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47900.3 | tubby like protein 3. Member of TLP family | 0 |
| RefSeq | XP_037475931.1 | tubby-like F-box protein 11 [Triticum dicoccoides] | 0 |
| Q10LG8 | Tubby-like F-box protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=TULP6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6AU33 | Tubby-like F-box protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG014710.