Basic Information
Locus ID:
gene:TRIDC2AG010890
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
breast cancer carboxy-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 51050813 | 51056833 | + | gene:TRIDC2AG010890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.06 | 153,243.55 Da | 43.77 | 69.81 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17738 | BRCT_TopBP1_rpt7 | 1096 | 1168 | 9.76893E-22 | - |
| CDD | cd15489 | PHD_SF | 1342 | 1398 | 1.69579E-9 | - |
| Pfam | PF00628 | PHD-finger | 1343 | 1399 | 5.9E-7 | IPR019787 |
| Pfam | PF12738 | twin BRCT domain | 62 | 125 | 5.6E-20 | IPR001357 |
| SUPERFAMILY | SSF52113 | BRCT domain | 12 | 142 | 3.86E-24 | IPR036420 |
| SUPERFAMILY | SSF52113 | BRCT domain | 1097 | 1199 | 1.25E-15 | IPR036420 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 1339 | 1405 | 4.43E-9 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1333 | 1421 | 7.3E-10 | IPR013083 |
| Gene3D | G3DSA:3.40.50.10190 | BRCT domain | 1094 | 1205 | 1.5E-25 | IPR036420 |
| Gene3D | G3DSA:3.40.50.10190 | BRCT domain | 50 | 168 | 7.9E-30 | IPR036420 |
| Gene3D | G3DSA:3.40.50.10190 | BRCT domain | 1206 | 1307 | 2.3E-14 | IPR036420 |
| SMART | SM00292 | BRCT_7 | 1089 | 1168 | 3.6E-5 | IPR001357 |
| SMART | SM00249 | PHD_3 | 1342 | 1399 | 0.0018 | IPR001965 |
| SMART | SM00292 | BRCT_7 | 1206 | 1293 | 9.7 | IPR001357 |
| SMART | SM00292 | BRCT_7 | 50 | 133 | 2.0E-14 | IPR001357 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 1340 | 1401 | 9.2586 | IPR019787 |
| ProSiteProfiles | PS50172 | BRCT domain profile. | 60 | 143 | 17.06748 | IPR001357 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 478 | 512 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 912 | 1053 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 512 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 401 | 441 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1400 | 1426 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 173 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 670 | 693 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 641 | 696 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1407 | 1426 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 943 | 1039 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 286 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02110.1 | transcription coactivators. | 0 |
| RefSeq | XP_037475663.1 | BRCT domain-containing protein At4g02110-like isoform X1 [Triticum dicoccoides] | 0 |
| O04251 | BRCT domain-containing protein At4g02110 OS=Arabidopsis thaliana OX=3702 GN=At4g02110 PE=4 SV=3 | 0 | |
| TrEMBL | A0A3B6AT67 | BRCT domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG010890.