Basic Information
Locus ID:
gene:TRIDC2AG010300
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 45941593 | 45945235 | + | gene:TRIDC2AG010300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.09 | 124,769.50 Da | 44.26 | 97.05 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 880 | 1149 | 5.94531E-82 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 198 | 216 | 0.74 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 245 | 304 | 1.8E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 877 | 1144 | 9.3E-43 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 350 | 667 | 3.77E-57 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 194 | 406 | 1.33E-47 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 653 | 764 | 1.65E-17 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 856 | 1147 | 4.65E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 119 | 234 | 2.61E-14 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 489 | 806 | 2.2E-87 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 835 | 945 | 1.9E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 946 | 1159 | 6.8E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 408 | 487 | 2.1E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 121 | 407 | 2.7E-78 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 196 | 219 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 726 | 750 | 24.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 874 | 1147 | 1.6E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 436 | 460 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 292 | 316 | 51.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 653 | 676 | 48.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 874 | 1153 | 35.184486 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 991 | 1003 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 880 | 902 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 726 | 739 | 5.7E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 198 | 211 | 5.7E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 44 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73080.1 | PEP1 receptor 1. Encodes a leucine-rich repeat receptor kinase. Functions as a receptor for AtPep1 to amplify innate immunity response to pathogen attacks. | 0 |
| RefSeq | XP_048554534.1 | leucine-rich repeat receptor-like protein kinase PEPR2 [Triticum urartu] | 0 |
| Q9SSL9 | Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana OX=3702 GN=PEPR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7TD30 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG010300.