HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene:TRIDC2AG007520
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
Chromosome Start End Strand ID
2A 33622185 33626323 - gene:TRIDC2AG007520
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.32 53,173.44 Da 35.70 100.31 0.24
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00069 Protein kinase domain 167 338 1.2E-21 IPR000719
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 138 468 4.86E-53 IPR011009
SUPERFAMILY SSF52058 L domain-like 2 78 1.08E-12 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 118 237 2.5E-11 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 238 477 1.1E-51 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1 83 2.1E-19 IPR032675
SMART SM00220 serkin_6 156 477 3.7E-12 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 156 477 28.456701 IPR000719
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 287 299 - IPR008271
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G47570.1 Leucine-rich repeat protein kinase family protein. 0
RefSeq XP_048554392.1 probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Triticum urartu] 0
Swiss-Prot C0LGP4 Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 0
TrEMBL A0A8R7P9N1 Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC2AG007520.

Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.