Basic Information
Locus ID:
gene:TRIDC2AG007120
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Domain Homologous to E6-AP Carboxyl Terminus with
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 32493946 | 32504176 | + | gene:TRIDC2AG007120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 190,627.52 Da | 49.40 | 86.74 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 1352 | 1759 | 5.11665E-123 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 1400 | 1764 | 7.6E-83 | IPR000569 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 1344 | 1757 | 6.8E-97 | IPR035983 |
| SUPERFAMILY | SSF48371 | ARM repeat | 104 | 542 | 4.61E-27 | IPR016024 |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1637 | 1762 | 4.9E-33 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 99 | 346 | 1.5E-33 | IPR011989 |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 1292 | 1526 | 1.3E-44 | - |
| SMART | SM00119 | hect_3 | 1366 | 1764 | 1.0E-92 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 1376 | 1764 | 59.450996 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1024 | 1051 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 857 | 966 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 921 | 963 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 554 | 609 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 857 | 896 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 905 | 919 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 407 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 577 | 609 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 982 | 1003 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38600.1 | HEAT repeat ;HECT-domain (ubiquitin-transferase). encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. | 0 |
| RefSeq | XP_037475476.1 | E3 ubiquitin-protein ligase UPL3-like [Triticum dicoccoides] | 0 |
| Q6WWW4 | E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana OX=3702 GN=UPL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453AFT4 | HECT-type E3 ubiquitin transferase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG007120.