Basic Information
Locus ID:
gene:TRIDC2AG006810
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 30634980 | 30643817 | - | gene:TRIDC2AG006810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.34 | 39,820.57 Da | 41.65 | 79.03 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 55 | 360 | 5.08336E-40 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 102 | 134 | 0.045 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 58 | 92 | 9.0E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 281 | 317 | 0.089 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 150 | 178 | 0.032 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 52 | 359 | 7.0E-58 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 38 | 360 | 1.3E-74 | IPR015943 |
| SMART | SM00320 | WD40_4 | 181 | 227 | 4.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 139 | 178 | 1.9E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 320 | 360 | 1.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 52 | 92 | 3.5E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 97 | 136 | 9.4E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 276 | 317 | 0.14 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 145 | 182 | 8.834696 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 145 | 187 | 11.143396 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 59 | 93 | 12.499222 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 59 | 93 | 15.153581 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 79 | 93 | - | IPR019775 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54520.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037475453.1 | WD repeat-containing protein 25-like [Triticum dicoccoides] | 0 |
| Q64LD2 | WD repeat-containing protein 25 OS=Homo sapiens OX=9606 GN=WDR25 PE=1 SV=3 | 0 | |
| TrEMBL | A0A3B6ARS7 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG006810.