Basic Information
Locus ID:
gene:TRIDC2AG005450
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 23267631 | 23275182 | - | gene:TRIDC2AG005450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 90,157.15 Da | 39.92 | 86.30 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 508 | 776 | 8.3072E-89 | - |
| CDD | cd01098 | PAN_AP_plant | 341 | 432 | 2.60122E-22 | - |
| CDD | cd00028 | B_lectin | 41 | 156 | 3.17189E-26 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 214 | 323 | 9.6E-30 | IPR000858 |
| Pfam | PF08276 | PAN-like domain | 350 | 418 | 2.3E-20 | IPR003609 |
| Pfam | PF01453 | D-mannose binding lectin | 80 | 182 | 2.1E-29 | IPR001480 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 506 | 771 | 6.4E-47 | IPR001245 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 69 | 221 | 8.24E-28 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 488 | 797 | 4.65E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 468 | 578 | 5.9E-35 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 28 | 154 | 1.7E-19 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 579 | 780 | 1.5E-56 | - |
| SMART | SM00108 | blect_4 | 38 | 156 | 5.4E-33 | IPR001480 |
| SMART | SM00220 | serkin_6 | 502 | 750 | 8.1E-35 | IPR000719 |
| SMART | SM00473 | ntp_6 | 350 | 431 | 1.5E-7 | IPR003609 |
| PIRSF | PIRSF000641 | SRK | 5 | 819 | 2.1E-247 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 32 | 154 | 18.374073 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 502 | 774 | 36.513081 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 345 | 432 | 9.671036 | IPR003609 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 508 | 531 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 624 | 636 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21380.1 | receptor kinase 3. encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. | 0 |
| RefSeq | XP_037481061.1 | receptor-like serine/threonine-protein kinase SD1-8 isoform X1 [Triticum dicoccoides] | 0 |
| O81905 | Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana OX=3702 GN=SD18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453ADP8 | Receptor-like serine/threonine-protein kinase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG005450.