Basic Information
Locus ID:
gene:TRIDC2AG002250
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 9869570 | 9875812 | - | gene:TRIDC2AG002250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 76,219.02 Da | 64.76 | 67.39 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16481 | RING-H2_TTC3 | 653 | 695 | 8.79305E-19 | - |
| Pfam | PF13639 | Ring finger domain | 654 | 695 | 3.9E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 653 | 697 | 2.31E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 628 | 699 | 2.9E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 654 | 694 | 1.2E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 654 | 695 | 12.386007 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 521 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 521 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 329 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 470 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 196 | 235 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34040.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037475210.1 | probable E3 ubiquitin-protein ligase HIP1 [Triticum dicoccoides] | 0 |
| O49500 | E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7P940 | RING-type domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG002250.