Basic Information
Locus ID:
gene:TRIDC2AG001450
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 4661324 | 4665300 | + | gene:TRIDC2AG001450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 120,638.90 Da | 37.39 | 105.77 | 0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 491 | 546 | 1.6E-11 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 294 | 353 | 5.1E-11 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 125 | 146 | 1.3 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 796 | 1008 | 3.8E-38 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 778 | 1072 | 4.24E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 400 | 1.26E-63 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 281 | 662 | 3.61E-71 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 387 | 698 | 8.0E-93 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 777 | 876 | 1.4E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 191 | 386 | 4.6E-53 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 877 | 1089 | 4.3E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 190 | 3.3E-31 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 292 | 315 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 340 | 364 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 533 | 556 | 75.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 389 | 412 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 220 | 244 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 413 | 437 | 5.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 316 | 339 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 146 | 170 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 630 | 654 | 91.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 510 | 532 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 557 | 581 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 485 | 509 | 170.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 793 | 1072 | 1.3E-23 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 582 | 605 | 120.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 793 | 1077 | 35.905319 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 799 | 822 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 923 | 935 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 630 | 643 | 8.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 512 | 525 | 8.1E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1095 | 1155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1100 | 1155 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24240.1 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_037475169.1 | receptor-like protein kinase 2 [Triticum dicoccoides] | 0 |
| Q9LHP4 | LRR receptor-like serine/threonine-protein kinase RGI1 OS=Arabidopsis thaliana OX=3702 GN=RGI1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6AQ70 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG001450.