Basic Information
Locus ID:
gene:TRIDC2AG001400
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2A | 4565503 | 4568647 | + | gene:TRIDC2AG001400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 99,312.35 Da | 38.55 | 103.16 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 528 | 587 | 2.7E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 59 | 4.4E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 381 | 441 | 6.4E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 692 | 785 | 5.1E-14 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 209 | 231 | 1.5 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 332 | 355 | 0.77 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 356 | 1.7E-57 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 667 | 906 | 4.63E-33 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 352 | 614 | 1.25E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 672 | 771 | 1.9E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 301 | 625 | 1.4E-85 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 161 | 300 | 5.8E-43 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 772 | 917 | 1.3E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 160 | 1.8E-37 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 90 | 114 | 60.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 330 | 354 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 138 | 162 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 404 | 427 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 574 | 599 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 428 | 452 | 13.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 428 | 457 | 130.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 184 | 206 | 750.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 550 | 573 | 750.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 207 | 233 | 38.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 138 | 168 | 75.0 | - |
| SMART | SM00369 | LRR_typ_2 | 502 | 526 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 256 | 279 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 303 | 325 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 207 | 230 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 231 | 255 | 26.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 404 | 419 | 650.0 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 186 | 208 | 7.288416 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 691 | 919 | 12.202602 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 697 | 720 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 210 | 223 | 4.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 231 | 244 | 4.7E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47090.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037480950.1 | probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Triticum dicoccoides] | 0 |
| Q1MX30 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453A8H4 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2AG001400.