Basic Information
Locus ID:
gene:TRIDC1BG071820
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 675135908 | 675140562 | + | gene:TRIDC1BG071820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.58 | 58,475.37 Da | 42.85 | 75.50 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 337 | 370 | 0.17 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 484 | 512 | 0.0095 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 295 | 333 | 0.0029 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 428 | 467 | 1.3E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 234 | 512 | 9.16E-52 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 380 | 523 | 6.7E-28 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 100 | 379 | 1.2E-26 | IPR015943 |
| SMART | SM00320 | WD40_4 | 378 | 417 | 24.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 291 | 333 | 2.3E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 226 | 267 | 210.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 427 | 467 | 3.4E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 472 | 512 | 3.6E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 336 | 374 | 2.4E-4 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 434 | 472 | 12.525585 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 300 | 338 | 9.836508 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 300 | 342 | 12.981398 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 434 | 476 | 15.420926 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 454 | 468 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 320 | 334 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 254 | 268 | 1.9E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 454 | 468 | 1.9E-7 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 320 | 334 | 1.9E-7 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18905.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_020191440.1 | periodic tryptophan protein 1 homolog [Aegilops tauschii subsp. strangulata] | 0 |
| Q9P775 | Uncharacterized WD repeat-containing protein C17D11.16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1711.16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5Z6A8 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG071820.