Basic Information
Locus ID:
gene:TRIDC1BG071580
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CDPK6
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 674035700 | 674039887 | - | gene:TRIDC1BG071580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 45,721.55 Da | 39.88 | 88.06 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 1 | 207 | 3.86393E-109 | - |
| CDD | cd00051 | EFh | 327 | 388 | 1.45327E-17 | IPR002048 |
| CDD | cd00051 | EFh | 256 | 315 | 1.00651E-17 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 256 | 316 | 9.4E-12 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 1 | 208 | 2.0E-58 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 326 | 388 | 2.4E-14 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 232 | 2.02E-67 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 248 | 388 | 7.37E-46 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 216 | 391 | 4.2E-60 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 36 | 215 | 1.0E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 35 | 6.0E-9 | - |
| SMART | SM00054 | efh_1 | 291 | 319 | 0.002 | IPR002048 |
| SMART | SM00054 | efh_1 | 255 | 283 | 1.2E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 327 | 355 | 0.001 | IPR002048 |
| SMART | SM00220 | serkin_6 | 1 | 208 | 1.5E-59 | IPR000719 |
| SMART | SM00054 | efh_1 | 362 | 390 | 8.2E-7 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 251 | 286 | 14.401823 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 323 | 358 | 14.736568 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 287 | 322 | 11.75176 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 208 | 40.809818 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 359 | 393 | 13.007053 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 264 | 276 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 70 | 82 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 371 | 383 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 336 | 348 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 300 | 312 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23650.1 | calcium-dependent protein kinase 6. Encodes calcium dependent protein kinase 3 (CPK3), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK3 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. CPK6 is also a member of the Arabidopsis CDPK family. | 0 |
| RefSeq | XP_037473729.1 | calcium-dependent protein kinase 15-like [Triticum dicoccoides] | 0 |
| Q6I587 | Calcium-dependent protein kinase 15 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK15 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6A287 | Calcium-dependent protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG071580.