Basic Information
Locus ID:
gene:TRIDC1BG071310
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 673187702 | 673246717 | - | gene:TRIDC1BG071310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.42 | 64,018.70 Da | 45.43 | 79.88 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 273 | 538 | 8.70818E-96 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 100 | 192 | 2.1E-11 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 268 | 534 | 6.7E-50 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 3 | 77 | 1.5E-13 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 249 | 557 | 1.24E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 343 | 544 | 4.1E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 234 | 342 | 4.7E-35 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 86 | 194 | 1.3E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 1 | 79 | 3.5E-19 | IPR038408 |
| SMART | SM00220 | serkin_6 | 267 | 501 | 1.4E-26 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 86 | 194 | 17.366905 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1 | 80 | 16.117714 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 267 | 543 | 37.587265 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 273 | 295 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 388 | 400 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_037473719.1 | cysteine-rich receptor-like protein kinase 6 [Triticum dicoccoides] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5Z6F5 | Cysteine-rich receptor-like protein kinase 25 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG071310.