Basic Information
Locus ID:
gene:TRIDC1BG071300
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 673172361 | 673186464 | - | gene:TRIDC1BG071300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 72,074.61 Da | 44.65 | 84.69 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 358 | 623 | 1.46364E-93 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 39 | 130 | 1.4E-16 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 153 | 245 | 4.8E-11 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 353 | 619 | 1.3E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 334 | 639 | 5.13E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 30 | 132 | 6.7E-23 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 316 | 427 | 5.1E-35 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 139 | 247 | 4.3E-20 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 428 | 629 | 1.3E-58 | - |
| SMART | SM00220 | serkin_6 | 352 | 586 | 1.5E-26 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 29 | 133 | 18.371687 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 139 | 247 | 17.203966 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 352 | 628 | 37.474194 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 473 | 485 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 358 | 380 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_037473723.1 | cysteine-rich receptor-like protein kinase 6 [Triticum dicoccoides] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5Z6F5 | Cysteine-rich receptor-like protein kinase 25 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG071300.