Basic Information
Locus ID:
gene:TRIDC1BG070480
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 670821717 | 670825308 | - | gene:TRIDC1BG070480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.10 | 118,098.93 Da | 33.52 | 107.72 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 521 | 579 | 6.0E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 779 | 1051 | 2.1E-41 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 76 | 2.9E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 617 | 675 | 4.6E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 129 | 189 | 1.1E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 456 | 507 | 6.2E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 301 | 357 | 2.2E-6 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 756 | 1054 | 1.31E-70 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 335 | 682 | 5.49E-63 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 409 | 6.46E-64 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 854 | 1068 | 9.6E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 316 | 2.4E-71 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 414 | 717 | 1.2E-86 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 741 | 853 | 3.6E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 317 | 413 | 5.0E-26 | IPR032675 |
| SMART | SM00365 | LRR_sd22_2 | 638 | 664 | 25.0 | - |
| SMART | SM00220 | serkin_6 | 778 | 1053 | 6.1E-29 | IPR000719 |
| SMART | SM00365 | LRR_sd22_2 | 151 | 181 | 190.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 518 | 544 | 120.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 323 | 349 | 100.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 470 | 491 | 710.0 | - |
| SMART | SM00369 | LRR_typ_2 | 638 | 661 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 518 | 541 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 542 | 566 | 0.13 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 662 | 687 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 176 | 200 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 470 | 493 | 6.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 614 | 637 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 151 | 175 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 127 | 150 | 360.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 323 | 347 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 225 | 248 | 11.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 778 | 1062 | 35.142082 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 784 | 806 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 899 | 911 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 638 | 651 | 1.0E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 545 | 558 | 1.0E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47090.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037473676.1 | LRR receptor-like serine/threonine-protein kinase GSO1 isoform X1 [Triticum dicoccoides] | 0 |
| C0LGP4 | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5Z696 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG070480.