Basic Information
Locus ID:
gene:TRIDC1BG068040
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
DNA binding domain with preference for A/T rich regions
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 658330116 | 658350530 | - | gene:TRIDC1BG068040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.04 | 76,619.21 Da | 42.09 | 77.82 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 262 | 538 | 8.99E-22 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 66 | 540 | 2.9E-22 | IPR015943 |
| SMART | SM00320 | WD40_4 | 388 | 431 | 5.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 343 | 379 | 1.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 435 | 474 | 15.0 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 108 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 79 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19485.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037473531.1 | uncharacterized protein LOC119349583 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B5Z4C5 | General transcription factor 3C polypeptide 2 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG068040.