Basic Information
Locus ID:
gene:TRIDC1BG065600
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UBC25
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 645490925 | 645495261 | - | gene:TRIDC1BG065600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 59,112.75 Da | 36.54 | 69.08 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 261 | 387 | 4.08452E-37 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 262 | 392 | 3.9E-25 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 252 | 427 | 2.28E-43 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 219 | 498 | 1.9E-90 | IPR016135 |
| SMART | SM00212 | ubc_7 | 261 | 418 | 2.2E-23 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 258 | 418 | 37.096825 | IPR000608 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 510 | 525 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 508 | 531 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15355.1 | ubiquitin-conjugating enzyme 25. | 0 |
| RefSeq | XP_037473414.1 | putative ubiquitin-conjugating enzyme E2 38 [Triticum dicoccoides] | 0 |
| Q9LUQ5 | Probable ubiquitin-conjugating enzyme E2 25 OS=Arabidopsis thaliana OX=3702 GN=UBC25 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5Z4V5 | UBC core domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG065600.