Basic Information
Locus ID:
gene:TRIDC1BG063850
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Guanine nucleotide-binding protein subunit beta-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 637100241 | 637102572 | - | gene:TRIDC1BG063850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 36,687.96 Da | 32.27 | 85.97 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 15 | 331 | 4.16638E-88 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 115 | 150 | 9.3E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 256 | 282 | 0.0058 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 307 | 330 | 0.0056 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 15 | 52 | 1.9E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 207 | 242 | 1.8E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 167 | 200 | 5.8E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 72 | 108 | 3.5E-7 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 12 | 334 | 1.01E-74 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 13 | 334 | 1.3E-129 | IPR015943 |
| SMART | SM00320 | WD40_4 | 245 | 282 | 0.38 | IPR001680 |
| SMART | SM00320 | WD40_4 | 203 | 242 | 3.1E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 12 | 52 | 6.2E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 69 | 108 | 6.7E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 152 | 200 | 7.4E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 111 | 150 | 1.1E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 292 | 331 | 0.01 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 210 | 251 | 15.019908 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 19 | 55 | 10.047417 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 76 | 117 | 14.585471 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 19 | 55 | 12.045688 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 166 | 203 | 10.917412 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 210 | 247 | 11.444681 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 118 | 150 | 12.288313 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 76 | 112 | 11.523771 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 166 | 209 | 13.549507 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 118 | 150 | 14.886235 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 187 | 201 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 39 | 53 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 95 | 109 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 229 | 243 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 39 | 53 | 8.2E-9 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 137 | 151 | 8.2E-9 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 187 | 201 | 8.2E-9 | IPR020472 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18080.1 | Transducin/WD40 repeat-like superfamily protein. Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene. | 0 |
| RefSeq | XP_037473330.1 | guanine nucleotide-binding protein subunit beta-like protein A [Triticum dicoccoides] | 0 |
| P49027 | Small ribosomal subunit protein RACK1z OS=Oryza sativa subsp. japonica OX=39947 GN=RACK1A PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5Z4Q0 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG063850.