Basic Information
Locus ID:
gene:TRIDC1BG063120
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Hemerythrin HHE cation binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 633759392 | 633769103 | + | gene:TRIDC1BG063120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 139,807.94 Da | 49.57 | 73.60 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12108 | Hr-like | 654 | 813 | 1.36214E-26 | - |
| CDD | cd12108 | Hr-like | 306 | 434 | 4.12313E-18 | - |
| CDD | cd12108 | Hr-like | 50 | 178 | 6.13863E-31 | - |
| CDD | cd16464 | RING-H2_Pirh2 | 1123 | 1166 | 1.22041E-17 | - |
| Pfam | PF13639 | Ring finger domain | 1123 | 1165 | 7.8E-7 | IPR001841 |
| Pfam | PF14599 | Zinc-ribbon | 1171 | 1228 | 7.2E-23 | IPR039512 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 652 | 745 | 8.5E-6 | IPR012312 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 303 | 435 | 2.2E-7 | IPR012312 |
| Pfam | PF05495 | CHY zinc finger | 995 | 1070 | 1.1E-17 | IPR008913 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 53 | 180 | 2.1E-13 | IPR012312 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 986 | 1051 | 1.7E-16 | IPR037274 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1122 | 1170 | 1.02E-7 | - |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 1061 | 1116 | 1.83E-15 | IPR037275 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 649 | 872 | 4.0E-24 | - |
| Gene3D | G3DSA:2.20.28.10 | - | 1194 | 1235 | 6.5E-17 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 305 | 452 | 2.3E-17 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 45 | 198 | 8.3E-31 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1117 | 1168 | 5.7E-9 | IPR013083 |
| SMART | SM00184 | ring_2 | 1124 | 1165 | 8.9E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 1124 | 1166 | 11.087743 | IPR001841 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 988 | 1057 | 25.539185 | IPR008913 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 1060 | 1123 | 30.069431 | IPR017921 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 882 | 907 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18290.1 | zinc finger protein-related. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. | 0 |
| RefSeq | XP_037473294.1 | zinc finger protein BRUTUS-like [Triticum dicoccoides] | 0 |
| Q8LPQ5 | Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5Z4K1 | Zinc finger protein BRUTUS OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG063120.