Basic Information
Locus ID:
gene:TRIDC1BG061510
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 621252821 | 621260022 | + | gene:TRIDC1BG061510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.27 | 35,344.27 Da | 58.86 | 67.68 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 102 | 128 | 0.005 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 180 | 217 | 2.8E-7 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 95 | 307 | 7.83E-35 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 87 | 323 | 3.7E-36 | IPR015943 |
| SMART | SM00320 | WD40_4 | 89 | 128 | 0.0068 | IPR001680 |
| SMART | SM00320 | WD40_4 | 262 | 303 | 9.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 178 | 217 | 2.9E-8 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 185 | 219 | 11.840134 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 185 | 219 | 14.318126 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 96 | 137 | 10.34136 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 71 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14530.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037473204.1 | protein ANTHESIS POMOTING FACTOR 1-like [Triticum dicoccoides] | 0 |
| Q9LYK6 | Protein ANTHESIS POMOTING FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=APRF1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5Z3U4 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG061510.