Basic Information
Locus ID:
gene:TRIDC1BG061110
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
S-locus glycoprotein domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 619171386 | 619174849 | - | gene:TRIDC1BG061110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.78 | 87,660.74 Da | 42.05 | 86.12 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 345 | 431 | 8.83181E-24 | - |
| CDD | cd00028 | B_lectin | 31 | 152 | 1.09738E-29 | IPR001480 |
| CDD | cd14066 | STKc_IRAK | 502 | 767 | 6.77362E-88 | - |
| Pfam | PF01453 | D-mannose binding lectin | 76 | 180 | 1.1E-35 | IPR001480 |
| Pfam | PF00069 | Protein kinase domain | 499 | 762 | 1.7E-48 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 356 | 414 | 7.7E-16 | IPR003609 |
| Pfam | PF00954 | S-locus glycoprotein domain | 213 | 326 | 3.9E-25 | IPR000858 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 473 | 765 | 7.15E-76 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 62 | 218 | 2.49E-28 | IPR036426 |
| Gene3D | G3DSA:2.90.10.10 | - | 20 | 151 | 1.6E-22 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 571 | 773 | 2.8E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 462 | 570 | 4.4E-31 | - |
| SMART | SM00220 | serkin_6 | 496 | 763 | 2.5E-31 | IPR000719 |
| SMART | SM00473 | ntp_6 | 357 | 429 | 9.9E-6 | IPR003609 |
| SMART | SM00108 | blect_4 | 25 | 154 | 3.1E-38 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 1 | 790 | 1.7E-273 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 349 | 431 | 10.721747 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 496 | 768 | 35.891186 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 25 | 150 | 19.256413 | IPR001480 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 615 | 627 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 502 | 525 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_037442210.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Triticum dicoccoides] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5Z2P0 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG061110.