Basic Information
Locus ID:
gene:TRIDC1BG059980
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 609482520 | 609485033 | - | gene:TRIDC1BG059980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 88,766.78 Da | 32.42 | 83.34 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 334 | 418 | 3.90669E-18 | - |
| CDD | cd00028 | B_lectin | 52 | 160 | 1.3355E-20 | IPR001480 |
| CDD | cd00053 | EGF | 285 | 313 | 1.25526E-4 | - |
| Pfam | PF00954 | S-locus glycoprotein domain | 254 | 313 | 2.0E-9 | IPR000858 |
| Pfam | PF00069 | Protein kinase domain | 524 | 793 | 2.5E-49 | IPR000719 |
| Pfam | PF01453 | D-mannose binding lectin | 85 | 174 | 1.1E-20 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 362 | 394 | 1.8E-5 | IPR003609 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 500 | 797 | 1.89E-70 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 72 | 207 | 1.44E-24 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 596 | 808 | 7.3E-55 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 30 | 158 | 6.4E-18 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 489 | 595 | 2.2E-29 | - |
| SMART | SM00220 | serkin_6 | 521 | 809 | 6.4E-29 | IPR000719 |
| SMART | SM00108 | blect_4 | 44 | 160 | 8.7E-19 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 3 | 811 | 3.4E-205 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 28 | 157 | 15.637548 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 338 | 418 | 8.125277 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 521 | 809 | 35.820515 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 527 | 549 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 641 | 653 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34300.1 | lectin protein kinase family protein. | 0 |
| RefSeq | XP_037473114.1 | putative receptor protein kinase ZmPK1 [Triticum dicoccoides] | 0 |
| P17801 | Putative receptor protein kinase ZmPK1 OS=Zea mays OX=4577 GN=PK1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B5Z3I2 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG059980.