Basic Information
Locus ID:
gene:TRIDC1BG058960
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 602224998 | 602229547 | - | gene:TRIDC1BG058960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.83 | 44,391.10 Da | 36.30 | 83.95 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 99 | 128 | 0.031 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 261 | 297 | 0.041 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 11 | 299 | 1.47E-46 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 10 | 186 | 6.9E-27 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 187 | 376 | 8.1E-13 | IPR015943 |
| SMART | SM00320 | WD40_4 | 89 | 128 | 1.3E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 131 | 170 | 0.031 | IPR001680 |
| SMART | SM00320 | WD40_4 | 47 | 86 | 1.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 257 | 297 | 0.0013 | IPR001680 |
| SMART | SM00320 | WD40_4 | 216 | 254 | 250.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 175 | 212 | 81.0 | IPR001680 |
| PIRSF | PIRSF038169 | WD_rpt_55 | 3 | 408 | 4.7E-116 | IPR017422 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 97 | 137 | 8.904377 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 272 | 299 | 8.703868 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 284 | 298 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 115 | 129 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 356 | 408 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G34260.1 | transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_037473048.1 | WD repeat-containing protein 55-like [Triticum dicoccoides] | 0 |
| O80775 | WD repeat-containing protein 55 OS=Arabidopsis thaliana OX=3702 GN=WDR55 PE=1 SV=2 | 0 | |
| TrEMBL | A0A452ZMN2 | WD repeat-containing protein 55 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG058960.