Basic Information
Locus ID:
gene:TRIDC1BG058120
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 596481149 | 596481766 | + | gene:TRIDC1BG058120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 21,920.81 Da | 68.68 | 83.51 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 130 | 172 | 5.6099E-16 | - |
| Pfam | PF13639 | Ring finger domain | 129 | 172 | 2.1E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 110 | 183 | 5.89E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 95 | 176 | 1.3E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 130 | 171 | 2.6E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 130 | 172 | 12.415513 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 73 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46160.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037473010.1 | RING-H2 finger protein ATL67-like [Triticum dicoccoides] | 0 |
| O82353 | RING-H2 finger protein ATL67 OS=Arabidopsis thaliana OX=3702 GN=ATL67 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5Z229 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG058120.