Basic Information
Locus ID:
gene:TRIDC1BG057060
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Dip2/Utp12 Family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 590179614 | 590184428 | - | gene:TRIDC1BG057060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 88,279.36 Da | 38.52 | 85.68 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 235 | 537 | 1.32444E-53 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 50 | 83 | 0.12 | IPR001680 |
| Pfam | PF04003 | Dip2/Utp12 Family | 687 | 792 | 1.3E-26 | IPR007148 |
| Pfam | PF00400 | WD domain, G-beta repeat | 455 | 484 | 0.1 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 280 | 313 | 4.1E-8 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 320 | 356 | 3.5E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 405 | 442 | 1.1E-7 | IPR001680 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 203 | 564 | 3.61E-60 | IPR011047 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 10 | 272 | 1.26E-14 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 3 | 155 | 1.1E-14 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 505 | 656 | 2.6E-5 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 360 | 504 | 3.7E-26 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 156 | 359 | 5.8E-34 | IPR015943 |
| SMART | SM00320 | WD40_4 | 47 | 86 | 0.11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 232 | 272 | 89.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 615 | 646 | 91.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 91 | 135 | 110.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 446 | 484 | 5.1E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1 | 37 | 59.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 275 | 314 | 1.2E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 317 | 356 | 1.6E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 403 | 442 | 1.1E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 507 | 546 | 1.9 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 324 | 357 | 11.550137 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 282 | 313 | 11.65559 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 452 | 484 | 9.256512 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 452 | 484 | 11.043142 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 282 | 313 | 14.084198 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 324 | 357 | 13.950525 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 410 | 443 | 14.819399 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 410 | 443 | 12.235586 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 429 | 443 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 343 | 357 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 429 | 443 | 2.6E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 301 | 315 | 2.6E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 343 | 357 | 2.6E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 176 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 179 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15440.1 | periodic tryptophan protein 2. | 0 |
| RefSeq | XP_037472937.1 | periodic tryptophan protein 2-like [Triticum dicoccoides] | 0 |
| Q8VYZ5 | Periodic tryptophan protein 2 OS=Arabidopsis thaliana OX=3702 GN=PWP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5Z1S8 | Utp12 domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG057060.