Basic Information
Locus ID:
gene:TRIDC1BG055540
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UBP25
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 576209807 | 576218941 | + | gene:TRIDC1BG055540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 68,191.82 Da | 48.06 | 77.20 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02661 | Peptidase_C19E | 1 | 319 | 1.11621E-142 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 1 | 318 | 3.2E-48 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 1 | 318 | 1.96E-87 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 1 | 321 | 9.7E-91 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 1 | 321 | 49.30164 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 1 | 16 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14400.1 | ubiquitin-specific protease 25. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_037472842.1 | ubiquitin carboxyl-terminal hydrolase 25-like [Triticum dicoccoides] | 0 |
| Q9FPS2 | Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis thaliana OX=3702 GN=UBP25 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5Z2J7 | USP domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG055540.