Basic Information
Locus ID:
gene:TRIDC1BG055460
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Large proline-rich protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 575326000 | 575327174 | + | gene:TRIDC1BG055460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 11,870.63 Da | 30.10 | 100.19 | 0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 62 | 102 | 8.28136E-15 | - |
| Pfam | PF00240 | Ubiquitin family | 62 | 102 | 1.3E-13 | IPR000626 |
| Pfam | PF00230 | Major intrinsic protein | 15 | 61 | 2.0E-4 | IPR000425 |
| SUPERFAMILY | SSF81338 | Aquaporin-like | 2 | 61 | 4.06E-8 | IPR023271 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 60 | 101 | 3.45E-14 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 64 | 103 | 1.6E-13 | - |
| Gene3D | G3DSA:1.20.1080.10 | Glycerol uptake facilitator protein. | 1 | 63 | 2.7E-8 | IPR023271 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 61 | 102 | 15.013348 | IPR000626 |
| ProSitePatterns | PS00299 | Ubiquitin domain signature. | 68 | 93 | - | IPR019954 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42220.1 | Ubiquitin-like superfamily protein. | 0 |
| RefSeq | XP_037417396.1 | aquaporin NIP2-3-like [Triticum dicoccoides] | 0 |
| Q9AT74 | Aquaporin NIP2-3 OS=Zea mays OX=4577 GN=NIP2-3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453R6F9 | Aquaporin NIP2-1-like OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG055460.