Basic Information
Locus ID:
gene:TRIDC1BG054020
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 564670715 | 564677301 | + | gene:TRIDC1BG054020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 91,605.03 Da | 32.36 | 84.31 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 532 | 796 | 2.9549E-92 | - |
| CDD | cd01098 | PAN_AP_plant | 346 | 434 | 1.88245E-23 | - |
| CDD | cd00028 | B_lectin | 34 | 158 | 2.6959E-26 | IPR001480 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 528 | 794 | 2.4E-46 | IPR001245 |
| Pfam | PF01453 | D-mannose binding lectin | 76 | 183 | 7.6E-28 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 216 | 328 | 7.2E-30 | IPR000858 |
| Pfam | PF08276 | PAN-like domain | 350 | 418 | 2.5E-20 | IPR003609 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 63 | 221 | 7.85E-26 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 510 | 797 | 1.75E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 502 | 601 | 1.1E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 602 | 810 | 3.3E-60 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 21 | 155 | 4.9E-18 | IPR036426 |
| SMART | SM00473 | ntp_6 | 352 | 433 | 6.8E-14 | IPR003609 |
| SMART | SM00108 | blect_4 | 33 | 158 | 4.9E-27 | IPR001480 |
| SMART | SM00220 | serkin_6 | 526 | 799 | 2.3E-33 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 1 | 851 | 1.5E-279 | IPR024171 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 526 | 813 | 37.968884 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 350 | 434 | 10.32773 | IPR003609 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 27 | 156 | 17.453373 | IPR001480 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 295 | 331 | 10.524687 | IPR000742 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 647 | 659 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21380.1 | receptor kinase 3. encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. | 0 |
| RefSeq | XP_037472774.1 | receptor-like serine/threonine-protein kinase SD1-8 isoform X2 [Triticum dicoccoides] | 0 |
| O81905 | Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana OX=3702 GN=SD18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5Z158 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG054020.