Basic Information
Locus ID:
gene:TRIDC1BG052010
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CPK17
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 549500030 | 549502359 | - | gene:TRIDC1BG052010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.45 | 61,165.34 Da | 40.22 | 77.10 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 97 | 354 | 2.23974E-130 | - |
| Pfam | PF00069 | Protein kinase domain | 97 | 355 | 1.0E-69 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 403 | 463 | 4.9E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 472 | 535 | 3.7E-14 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 395 | 535 | 5.44E-48 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 81 | 374 | 1.35E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 373 | 534 | 1.3E-57 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 396 | 464 | 1.3E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 99 | 182 | 6.1E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 183 | 364 | 2.5E-56 | - |
| SMART | SM00220 | serkin_6 | 97 | 355 | 5.7E-89 | IPR000719 |
| SMART | SM00054 | efh_1 | 402 | 430 | 2.3E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 474 | 502 | 0.0036 | IPR002048 |
| SMART | SM00054 | efh_1 | 509 | 537 | 2.2E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 438 | 466 | 7.7E-5 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 97 | 355 | 46.067665 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 398 | 433 | 14.624987 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 434 | 469 | 12.449146 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 509 | 540 | 11.835447 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 470 | 505 | 15.015522 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 217 | 229 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 103 | 126 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 483 | 495 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 518 | 530 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 411 | 423 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 447 | 459 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 78 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19360.1 | calcium-dependent protein kinase 34. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_037472662.1 | calcium-dependent protein kinase 14 [Triticum dicoccoides] | 0 |
| Q5VQQ5 | Calcium-dependent protein kinase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5Z1U7 | Calcium-dependent protein kinase 34 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG052010.