Basic Information
Locus ID:
gene:TRIDC1BG051680
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 547790652 | 547794629 | - | gene:TRIDC1BG051680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 57,409.71 Da | 47.16 | 90.60 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 12 | 299 | 1.0266E-114 | - |
| CDD | cd00051 | EFh | 435 | 502 | 7.81348E-15 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 433 | 502 | 8.3E-14 | IPR002048 |
| Pfam | PF13202 | EF hand | 402 | 418 | 0.019 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 82 | 300 | 2.9E-56 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 312 | 2.7E-76 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 344 | 505 | 2.47E-33 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 128 | 343 | 2.8E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 71 | 127 | 2.6E-12 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 8 | 50 | 1.8E-5 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 344 | 511 | 2.5E-37 | - |
| SMART | SM00054 | efh_1 | 476 | 504 | 1.3E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 434 | 462 | 1.7E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 398 | 426 | 1.7 | IPR002048 |
| SMART | SM00220 | serkin_6 | 13 | 300 | 5.4E-86 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 394 | 429 | 8.906429 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 430 | 465 | 13.202322 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 472 | 507 | 14.457615 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 13 | 300 | 46.322079 | IPR000719 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 443 | 455 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 161 | 173 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 19 | 44 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 407 | 419 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 485 | 497 | - | IPR018247 |
| PRINTS | PR00450 | Recoverin family signature | 402 | 423 | 3.9E-10 | - |
| PRINTS | PR00450 | Recoverin family signature | 356 | 375 | 3.9E-10 | - |
| PRINTS | PR00450 | Recoverin family signature | 426 | 445 | 3.9E-10 | - |
| PRINTS | PR00450 | Recoverin family signature | 448 | 466 | 3.9E-10 | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G04720.1 | calcium-dependent protein kinase 21. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_048543167.1 | calcium and calcium/calmodulin-dependent serine/threonine-protein kinase [Triticum urartu] | 0 |
| Q6AVM3 | Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase OS=Oryza sativa subsp. japonica OX=39947 GN=CCAMK PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B5Z0M7 | Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG051680.