Basic Information
Locus ID:
gene:TRIDC1BG050380
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 537084754 | 537089218 | - | gene:TRIDC1BG050380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.74 | 73,524.23 Da | 42.21 | 91.33 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 51 | 279 | 2.36699E-74 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 50 | 284 | 4.3E-47 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 383 | 642 | 9.4E-37 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 41 | 279 | 6.53E-50 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 367 | 678 | 1.64E-68 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 41 | 288 | 1.7E-54 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 457 | 663 | 3.3E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 340 | 456 | 2.7E-19 | - |
| SMART | SM00220 | serkin_6 | 380 | 645 | 1.3E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 380 | 652 | 32.993717 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 501 | 513 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_037472557.1 | L-type lectin-domain containing receptor kinase S.7-like [Triticum dicoccoides] | 0 |
| A0A0P0VIP0 | L-type lectin-domain containing receptor kinase S.7 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRKS7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B5Z0N9 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG050380.