Basic Information
Locus ID:
gene:TRIDC1BG050110
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
ubiquitinyl hydrolase activity. It is involved in the biological process described with ubiquitin-dependent protein catabolic process
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 1B | 535130960 | 535132007 | - | gene:TRIDC1BG050110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 7,992.26 Da | 53.48 | 97.53 | 0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 39 | 69 | 4.8E-10 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 38 | 71 | 1.35E-12 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 32 | 73 | 1.6E-12 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 39 | 73 | 11.950241 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 40 | 55 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21280.2 | - | 0 |
| RefSeq | XP_022723679.1 | ubiquitin carboxyl-terminal hydrolase 7-like isoform X2 [Durio zibethinus] | 0 |
| Q92353 | Ubiquitin carboxyl-terminal hydrolase 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ubp6 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9PHZ7 | Ubiquitin carboxyl-terminal hydrolase OS=Zostera marina OX=29655 GN=ZOSMA_231G00060 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC1BG050110.